End-to-end ChIP-seq workflow from FASTQ files to annotated peaks. Covers QC, alignment, peak calling with MACS3, and peak annotation with ChIPseeker.
End-to-end CLIP-seq analysis from FASTQ to binding sites and motif enrichment. Use when analyzing protein-RNA interactions from CLIP-based methods. — from bg-szy/TOP-SKILLS
End-to-end copy number variant detection workflow from BAM files. Covers CNVkit analysis for exome/targeted sequencing with visualization and annotation.
Workflow from differential expression results to functional enrichment analysis. Covers GO, KEGG, Reactome enrichment with clusterProfiler and visualization.
End-to-end DNA sequencing workflow from FASTQ files to variant calls. Covers QC, alignment with BWA, BAM processing, and variant calling with bcftools or GATK HaplotypeCa — from…
End-to-end Hi-C analysis workflow from contact pairs to compartments, TADs, and loops. Covers cooler matrices, cooltools analysis, and visualization.
End-to-end workflow for detecting structural variants from long-read sequencing data. Covers ONT/PacBio alignment with minimap2 and SV calling with Sniffles or cuteSV.
End-to-end metagenomics workflow from FASTQ to taxonomic and functional profiles. Covers Kraken2 classification, Bracken abundance estimation, and HUMAnN functional profi — from…
End-to-end bisulfite sequencing workflow from FASTQ to differentially methylated regions. Covers Bismark alignment, methylation calling, and DMR detection with methylKit — from…
End-to-end multiome workflow for joint scRNA-seq + scATAC-seq analysis. Covers data loading, separate modality processing, and WNN integration with Seurat/Signac.
End-to-end neoantigen discovery from somatic variants to ranked vaccine candidates. Integrates HLA typing, MHC binding prediction, pVACtools neoantigen calling, and immun — from…
End-to-end outbreak investigation from pathogen isolates to transmission networks. Orchestrates MLST typing, AMR surveillance, phylodynamic dating, and transmission infer — from…
End-to-end RNA-seq workflow from FASTQ files to differential expression results. Covers QC, quantification (Salmon or STAR+featureCounts), and DESeq2 analysis with visual — from…
End-to-end single-cell RNA-seq workflow from 10X Genomics data to annotated cell types. Covers QC, normalization, clustering, marker detection, and cell type annotation — from…
End-to-end small RNA-seq analysis from FASTQ to differential miRNA expression. Use when analyzing miRNA, piRNA, or other small RNA sequencing data. — from bg-szy/TOP-SKILLS
End-to-end somatic variant calling from tumor-normal paired samples using Mutect2 or Strelka2. Covers preprocessing, variant calling, filtering, and annotation for cancer — from…
Open source biomedical Model Context Protocol (MCP) toolkit for connecting LLMs to biomedical data sources (PubMed, ClinicalTrials, Genomics).
bkend.ai authentication — email/social login, JWT tokens, RBAC, session management. Triggers: bkend auth, login, signup, JWT, RBAC, 인증, 로그인, 회원가입.
bkend.ai project tutorials (todo to SaaS) and common error troubleshooting. Triggers: bkend tutorial, cookbook, troubleshooting, 튜토리얼, 에러 해결.
bkend.ai database — CRUD, column types, filtering, sorting, relations, indexing. Triggers: bkend table, CRUD, column, filter, sort, relation, 테이블, 데이터.
bkend.ai MCP tools and AI integration expert skill. Covers 28 MCP tools (Fixed 3 + Project 6 + Table 9 + Data CRUD 5 + Env 3 + Schema 2), 4 MCP resources, OAuth 2.1 + PKCE…
bkend.ai onboarding — MCP setup, resource hierarchy, tenant/user model, first project. Triggers: bkend quickstart, onboarding, setup, MCP, 시작하기, 온보딩.
bkend.ai file storage — upload (presigned URL), download (CDN), visibility levels, buckets. Triggers: bkend file, upload, download, presigned URL, storage, 파일 업로드, 스토리지.
Core rules for bkit — PDCA methodology, level detection, agent triggering, quality standards. Triggers: bkit rules, core rules, methodology, 핵심 규칙, PDCA 규칙.
PDCA document templates — Plan, Design, Analysis, Report with consistent structure. Triggers: template, plan document, design template, 템플릿, 문서 양식.
Remove signs of AI-generated writing from text. Use when editing or reviewing text to make it sound more natural and human-written.
Brain-aware blame on a file or file:line. Combines git blame (who/when/commit) with the brain (which intent introduced this work, decisions affecting the file, recent edits log).
BLAST skill for sequence similarity searching, homology detection, and database querying
Skill di rigging procedurale per Blender. Armature con Bone Roll corretto, FK/IK dualità, weight painting algoritmico (distance-based), Shape Keys con Driver biomeccanici, Socket…
Skill di geometria 3D e orientamento spaziale per Blender. Coordinate systems, transform math, bounding box precisi, posizionamento oggetti, debug spaziale, normali in world…
Integracao com BMAD Method para escala adaptativa e workflows guiados. Detecta nivel de complexidade e ajusta agentes automaticamente.
AI-powered bone marrow morphology analysis, cell classification, and hematologic disorder diagnosis using deep learning on aspirate and biopsy images.
Analyze a folder of books and audiobooks: scan it, identify every book (author + title), enrich each with web data (year, genre, tags, short description, Goodreads rating), save a…
Verify Symfony project configuration including .env, services.yaml, doctrine settings, and framework requirements — from MakFly/superpowers-symfony
Apply BOUCH voice rules to any UK business copy: websites, emails, proposals, case studies, or LinkedIn. Covers language to use and avoid, tone, British spelling, and formatting.
Serves the user a random TikTok with brainrot commentary before starting any work. Auto-fires before every task per CLAUDE.md persona rules. Can also be invoked manually.
The CLARIFYING phase discusses each item one at a time to fully understand requirements
The EXPLORING phase gathers context about the project and forms an initial understanding
The VALIDATING phase runs the completeness gate to ensure design is ready for implementation
Use before any code changes - hard gate ensuring work never happens on main branch, with proper feature branch creation from correct base — from general/ai-tooling
Use when a new branch is about to start and the user asks to "plan la rama", "Fase -1", "propón el plan", or after project-kickoff emitted the snapshot.
Review code changes on a feature branch compared to a base branch (default: master). Checks for pattern consistency, code duplication, unnecessary variables, and proper use of…
Triage and merge open PRs on the bitcoin-sv/BRCs repository. Assigns unique sequential BRC numbers, renames files when needed, wires links into README.md / SUMMARY.md / dir…
Brevard County site plan development expertise. Invoke when analyzing parcels, checking zoning, or navigating the permit process in Brevard County, Florida.
Check a LaTeX coursework submission against the requirements in a supplied PDF assessment brief. Use when verifying format, required sections, word limits, or deliverables before…
Check status of all broods, with per-strain status. Reports per-strain tmux session state, branch existence, and PR status from external observables.
Generate comprehensive API endpoint documentation from Bruno (.bru) files by mapping requests to a Django4Lyfe/Diversio-style backend implementation (Django REST Framework or…
Upgrade bstack to the latest version. Detects global vs vendored install, runs the upgrade, and shows what's new.
Erstellt schulische Dokumente im offiziellen BS:WI Corporate Design. Nutze diesen Skill für Arbeitsblätter, Handouts, Infobriefe, Formulare, E-Mails oder andere Unterlage — from…
By-The-Way: 작업 중 개선 제안을 즉시 수집하고 관리하는 스킬. Triggers: /btw, /btw list, /btw analyze, /btw promote, /btw stats Keywords: btw, 개선, 제안, suggestion, improve, idea, feedback
Driver-based budgeting and forecasting skill with rolling forecast support and variance analysis
Scan open PRs and generated ECC/agent artifacts for high-coverage review risks before they are accepted.
自动化构建 React Native Android APK。包括依赖检查、Debug/Release 构建、设备安装。使用此 Skill 来构建 APK、测试安装、或排查构建问题。
Design and build a complete Next.js web application from a problem description. Runs a full product thinking pipeline — problem mapping, personas, interviews, MVP definition —…
Systematic methodology for implementing comprehensive build quality gates using BAIME framework. Achieved 98% error coverage with 17.4s detection time, reducing CI failures from…
Verifies build output integrity after code changes. Runs builds, validates artifact structure, checks for regressions in bundle size, asset references, and static export…
Building code compliance checking skill for IBC occupancy, construction type, and area requirements
GLAW Investigations Bureau — Counter-Fraud Agent. The badges-of-fraud engine: fraud-pattern recognition, document authentication (uses *.meta.json metadata to flag…
GLAW Investigations Bureau — Intelligence Fusion Agent. The brain that fuses every other agent's product: multi-source correlation, link analysis, entity resolution (dedupe…
GLAW Investigations Bureau — Human Intelligence (HUMINT) Agent. The people-reader of the bench: assesses sources and witnesses, scores credibility 0–5 against the rubric, builds…