Discovers de novo motifs and tests known motif enrichment in ChIP-seq, ATAC-seq, or other peak sequences using HOMER, MEME-ChIP (STREME, CentriMo, TOMTOM, FIMO), monaLisa, and…
Creates DE-specific diagnostic and result visualizations using DESeq2/edgeR built-in functions and lightweight ggplot2 wrappers.
Predict peptide-MHC class I and II binding affinity using MHCflurry and NetMHCpan neural network models. Identify potential T-cell epitopes from protein sequences.
Predict peptide-MHC class I and II binding affinity using MHCflurry and NetMHCpan neural network models. Identify potential T-cell epitopes from protein sequences.
Predict peptide-MHC class II (HLA-DR/DQ/DP) binding and presentation for CD4 T-cell epitopes with NetMHCIIpan-4.3 and MixMHC2pred-2.0.
Performs ML-based protein-ligand pose prediction and scoring using DiffDock-L (diffusion-based), Boltz-1 / Boltz-2 (foundation model with affinity), Chai-1, AlphaFold3 ligand,…
Builds and applies 3D pharmacophore models using RDKit Pharm3D, the apo2ph4 receptor-based workflow (Heider et al 2022/2023 J Chem Inf Model 63:147-158), Pharmer / Pharmit…
Peptide-spectrum matching and protein identification from MS/MS data. Use when identifying peptides from tandem mass spectra.
Peptide-spectrum matching and protein identification from MS/MS data. Use when identifying peptides from tandem mass spectra.
Analyzes chemical libraries by scaffold using Bemis-Murcko scaffolds, generic frameworks, cyclic skeletons, matched molecular pair (MMP) analysis via mmpdb, R-group decomposition,…
Lint and format frontend code with Biome 2.4. Covers type-aware linting, GritQL custom rules, domains, import organizer, and migration from ESLint/Prettier.
Use when formatting JavaScript/TypeScript code with Biome's fast formatter including patterns, options, and code style management.
Biome is a high-performance Rust-based toolchain for JavaScript, TypeScript, JSX, JSON, CSS, and GraphQL that unifies formatting and linting in a single tool.
Automates migration from ESLint and Prettier to Biome (formerly Rome) by parsing .eslintrc and .prettierrc configs, mapping rules to biome.json equivalents, and running biome…
Expert guide for Biome (Rust-based linter + formatter), ESLint/Prettier migration, and code quality tooling / Panduan ahli Biome (linter + formatter berbasis Rust), migrasi dari…
Biome linter/formatter setup. Use when configuring Biome as an alternative to ESLint + Prettier.
Biome v2 linter/formatter reference. Auto-loads when working with biome.json, biome config, linting rules, formatting, import organization, biome check.
Generates structured biomedical outlines for review articles, discussion sections, and thesis proposals.
Agent runbook for Proteina-Complexa parameter sweeps through the separately installed first-party CLI and config generator.
Покрывает CLI-инструменты Bitrix — php bitrix/bitrix.php, генераторы make:module/make:controller/make:tablet/make:service/make:event/make:component/make:request, команды ядра…
Покрывает PSR-3 логирование в Bitrix — Bitrix\Main\Diag\Logger, FileLogger, SysLogger, NullLogger, LogFormatter, секция loggers в .settings.php, именованные логгеры ядра…
Use when setting up Bknd SDK in a frontend application. Covers Api class initialization, token storage, auth state handling, React integration with BkndBrowserApp and use — from…
Use when initializing or configuring the Bknd authentication system. Covers enabling auth, configuring password strategy, setting up JWT and cookie options, defining roles, and…
Scaffold a Blazor index/listing page (.razor + .razor.cs) for a feature, following the Umbrella UmbrellaGrid pattern with breadcrumb, auth policy, and action column.
Generates Blender Python (bpy) scripts that programmatically create Geometry Nodes modifier trees, using the node_groups API and GeometryNodeTree interface for parametric 3D asset…
UV unwrap, atlas-map, project textures, use alpha decals, bake maps/lightmaps, and prepare texture-driven Blender assets for glTF/GLB export.
Generate blessed widgets for Node.js terminal UIs with boxes, lists, forms, and dashboard layouts.
Configure a PreToolUse hook to prevent AI agents from skipping git pre-commit hooks with --no-verify and other bypass flags.
Generate a new AEM Edge Delivery Services block from a natural-language description. Produces the JavaScript file with a decorate() function, a scoped CSS file, example document…
Set up the Bloomberg MCP server for Claude Desktop, Claude Code, or Codex. Use when Bloomberg tools are unavailable, after first install, or when bloomberg_status reports errors.
Generates professional board meeting presentation content (board-deck.md) with executive summary, financials, product updates, GTM metrics, team/hiring, strategic decisions, and…
Gera o slide de People & Culture pra board meeting em formato 16:9 (1920x1080) HTML pronto pra printar/exportar PDF.
Integrate React+Vite web apps with bodhi-js-sdk for local LLM integration. Use when user asks to: "integrate bodhi", "add bodhi sdk", "connect to bodhi", "setup bodhi provider",…
BOE CLI skill para M&A en España. Guía completa para que un agente AI consulte legislación española relevante para operaciones de fusiones y adquisiciones usando la API del BOE…
Generate core/ module scaffolds for cli-web-* CLIs. Produces exceptions.py, client.py, helpers.py, config.py, output.py, and (for batchexecute) the rpc/ subpackage.
Für Boilerplate-Klauseln: Katalog mit Mustertexten: ordnet Norm, Beweislast und Gegenargument; Ergebnis: Prüfprodukt mit Risiko und nächstem Schritt.
Katalog typischer Boilerplate-Klauseln im deutschen Wirtschaftsvertrag mit Wirksamkeitsanalyse und Mustertexten.
Safely update aem.js, aem.css, and other core AEM Edge Delivery Services boilerplate files when Adobe releases new versions.
Boltz CLI setup and auth. Use when installing, updating, verifying, or authenticating `boltz-api`, or fixing missing CLI, PATH, sandbox, browser login, or auth errors.
Generates Bill of Materials (BOM) from project descriptions for Arduino/ESP32/RP2040 projects. Use when user needs component lists, parts shopping lists, cost estimates, or asks…
בונה דגם תלת־ממד מפורט של חפץ אמיתי (מכונית, טנק, מטוס, ספינה, מכונה, מבנה) בקוד בלבד ב־Three.js, בלי קבצי מודל ובלי תמונות.
처음 읽기 시작한 책의 디렉토리를 생성하고, 하위에 목차를 기록한 README.md 파일을 생성
Generates comprehensive book structures for Docusaurus with proper hierarchy, navigation, and SEO. Creates chapter outlines, sidebar configurations, and ensures consistent…
Bootstrap or guide a reproducible Rust Cargo project with explicit package or workspace shape, cargo new or cargo init usage, edition and MSRV checks, rust-toolchain handling,…
Build a Bootstrap 6 starter project using just npm and command-line tools (no bundler). Use when setting up Bootstrap with npm, compiling Bootstrap's Sass to CSS from the command…
Include and bundle Bootstrap 6's CSS and JavaScript in a project using Parcel. Use when setting up Bootstrap with Parcel, bundling Bootstrap's Sass and JS through Parcel, or…
Fastest route to a deployed live evaluation using a pre-built Truesight template. Use when the user wants a quick start without building judgment configs from scratch.
Bootstrap new Python projects and multi-package workspaces with uv on macOS using deterministic scripts and consistent defaults.
Include and bundle Bootstrap 6's CSS and JavaScript in a project using Vite. Use when setting up Bootstrap with Vite, bundling Bootstrap's Sass and JS through Vite, or creating a…
Include and bundle Bootstrap 6's CSS and JavaScript in a project using Webpack. Use when setting up Bootstrap with Webpack, configuring Webpack loaders for Bootstrap's Sass and…
Generate boundary value test cases for numeric ranges, string lengths, date ranges, collection sizes, and domain-specific constraints using systematic analysis techniques
Generates CONTEXT.md documentation for bounded contexts by exploring existing code and YAML definitions.
Generate a professional, VC-ready 10-page Business Plan (BP) pitch deck as a .pptx file. Designed for startup founders preparing investor pitches, fundraising roadshows, and…
XBG Boilerplate SvelteKit — master reference for the SvelteKit 5 boilerplate project
Use better-route 0.5.0 AtomicIdempotencyMiddleware for high-side-effect write endpoints where concurrent duplicate requests must not execute twice.
Brain OS 安装引导。Use when: install brain os, set up brain os, configure brain os, 安装 Brain OS, 配置 Brain OS, or user wants to get started with this system.
Install @reopt-ai/brandapp-sdk in a consumer project. Sets up auth, OAuth client, EAV, API routes, and env config.
Review consumer project code for @reopt-ai/brandapp-sdk usage anti-patterns and suggest improvements.
Branded social-carousel skill. Use when Codex needs to turn ideas or content into a slide-by-slide social carousel with brand-consistent copy and visual.
Brandenburgische Besonderheit: Hoher Bestand an Schloessern und Gutsanlagen, oft mit komplexer Eigentumsgeschichte nach Bodenreform 1945-1949 und Mauerfall 1990.