Guide to building offline-first Capacitor apps with data synchronization, caching strategies, and conflict resolution.
This skill performs protein-mediated regulatory community analysis from ChIA-PET datasets and provide a way for visualizing the communities.
Performs ChIP-specific biological validation. It calculates metrics unique to protein-binding assays, such as Cross-correlation (NSC/RSC) and FRiP.
This skill should be used when the user asks to "write php", "php 8", "composer", "phpunit", "pest", "phpstan", "psalm", "psr", or works with modern PHP language patterns and…
Monitor the openai/parameter-golf competition leaderboard by fetching PR data from GitHub. Use this skill whenever the user asks about the parameter-golf competition, leaderboard…
This skill should be used when the user asks for "email stats", "inbox stats", "email analytics", "how many unread", or wants to see inbox metrics.
Performs comprehensive audits to detect placeholder code, mock data, TODO markers, and incomplete implementations in codebases.
This skill should be used when working with pre-trained transformer models for natural language processing, computer vision, audio, or multimodal tasks.
Synthesize outputs from multiple AI models into a comprehensive, verified assessment. Use when: (1) User pastes feedback/analysis from multiple LLMs (Claude, GPT, Gemini, etc.)…
Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData. Apply this skill for complete single-cell workflows including quality contro — from…
Guide implementation of OAuth 2.1 / OIDC authentication using Better Auth with the OIDC Provider plugin.
This skill annotates chromatin loops, including enhancer/promoter assignments, CTCF-peak overlap. It automatically constructs enhancer and promoter sets when missing and outputs…
This skill should be used when the user asks to "check documentation", "latest API", "library docs", "context7", or needs up-to-date library documentation.
This skill provides guidance for fitting peaks in Raman spectroscopy data, particularly for materials like graphene.
This skill should be used when the user asks to "/gobby-agents", "spawn agent", "start agent", "list agents".
Evaluate the latest Universal Agent run for errors, bottlenecks, and opportunities for improvement. This skill should be used after an agent run completes to perform a critical…
Perform AI-powered web searches with real-time information using Perplexity models via LiteLLM and OpenRouter.
Super Ralph Wiggum - autonomous iteration loops with templates, PRD support, progress tracking, and browser testing.
When the user requests information about academic benchmarks, datasets, or research papers, particularly in machine learning, deep learning, or logical reasoning domains.
This skill should be used when comparing Lisa's source templates against a target project's implementation to identify drift.
This skill should be used when the user asks to "create a command", "write a slash command", "build a plugin command", or wants to add custom commands to Claude Code.
Follow project-wide development conventions including consistent project structure, clear documentation, version control best practices, environment configuration, and dependency…
Use this skill when you need to research and gather external best practices, documentation, and examples for any technology, framework, or development practice.
Validate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences fold correctly, (2) Predicting binder-target comple — from…
Configures and manages database connection pools, with a focus on SQLAlchemy. Use this skill for tasks involving connection pool configuration, sizing, lifecycle management,…
Model interpretability and explainability using SHAP (SHapley Additive exPlanations). Use this skill when explaining machine learning model predictions, computing feature — from…
This skill should be used when registering hooks, creating custom hooks for module APIs, debugging hook execution, handling async in hooks, or preventing memory leaks from unclean…
Identifies bug-introducing commits using SZZ-style analysis based on bug-fixing commits, commit history, and code blame information.
Enhanced web search and real-time content retrieval via Grok API with forced tool routing. Use when: (1) Web search / information retrieval / fact-checking, (2) Webpage content…
This skill should be used when the user asks to "start an LLM project", "design batch pipeline", "evaluate task-model fit", "structure agent project", or mentions pipelin — from…
This skill should be used when the user asks to "set up a web server", "configure HTTP or HTTPS", "perform SNMP enumeration", "configure SMB shares", "test network services", or…
When the user requests to find official media content like movie trailers, YouTube links, or other online resources, this skill performs targeted web searches to locate specific…
Generate friendly greetings in multiple languages and styles. Use this skill when users request greetings, welcome messages, or multilingual hello messages for various co — from…
This skill should be used when the user asks to "audit domain authority", "domain trust score", "CITE audit", "how authoritative is my site", "domain credibility check", "is my…
This skill should be used when creating custom subagents for Claude Code, configuring specialized AI assistants, or when the user asks about agent creation, agent configuration,…
Load, prepare, and apply quality control (QC) to single-cell RNA-seq data using Seurat. Performs data loading, QC filtering, normalization, and multi-sample integration.
This skill should be used when the user asks about "Effect AI", "@effect/ai", "LLM integration", "AI tool use", "AI execution planning", "building AI agents", "AI providers",…
PROACTIVELY activates for ANY task with clear success criteria. This skill should be used when the user provides tasks like: "fix the bug", "add tests", "implement featur — from…
This skill provides a complete pipeline for integrating CpG methylation data with chromatin features such as ATAC-seq signal, H3K27ac, H3K4me3, or other histone marks/TF signals.
Use this skill when the user asks "gas price", "how much is gas", "current gas", "check gas fees", or mentions checking gas costs on EVM chains (Ethereum, Polygon, Arbitrum,…
INVOKE THIS SKILL when implementing human-in-the-loop patterns, pausing for approval, or handling errors in LangGraph.
This skill should be used when the user asks to 'create a skill', 'improve a skill', 'edit a skill', 'add enforcement patterns', 'audit skill enforcement', or needs to…
Use this skill when the user asks "solana balance", "sol balance", "solana account", "is this a program", or mentions checking account info on Solana.
Before committing to an implementation plan, run this skill to stress-test the proposed architecture.
This skill should be used when the user asks to "explain", "break down", "help me understand", "teach me about", or requests clarification of technical concepts (AI, ML, software…
Comprehensive Convex development skill for building production-ready apps. Covers functions (queries, mutations, actions, HTTP endpoints), schemas, real-time subscriptions, cron…
This skill performs PCA-based A/B compartments calling on Hi-C .mcool datasets using pre-defined MCP tools from the cooler-tools, cooltools-tools, and plot-hic-tools servers.
Scaffold a native-looking, effective Electron app with best practices baked in. Creates a production-ready Electron application with security hardening, modern tooling, proper IPC…
INVOKE THIS SKILL when you need human-in-the-loop approval, custom middleware, or structured output. Covers HumanInTheLoopMiddleware for human approval of dangerous tool — from…
This skill identifies novel transcription factor binding motifs in the promoter regions of genes, or directly from genomic regions of interest such as ChIP-seq peaks, ATAC-seq…
This skill should be used when the user asks to \"start a data science project\", \"brainstorm analysis\", \"plan a data analysis\", or wants to clarify analysis requirements.
This skill implements backup strategies for databases and applications. It generates configuration files and setup code to ensure data protection and disaster recovery.
INVOKE THIS SKILL when building evaluation pipelines for LangSmith. Covers three core components: (1) Creating Evaluators - LLM-as-Judge, custom code; (2) Defining Run Functions -…
This skill performs genome-wide DNA methylation profiling. It supports single-sample and multi-sample workflows to compute methylation density distributions, genomic feature…
This skill should be used when the user asks to "set up CI", "configure GitHub Actions", "create a workflow", "pin actions", "use ratchet", "set up Claude code review", "configure…
Multiagent AI system for scientific research assistance that automates research workflows from data analysis to publication.
This skill disposes of an object by placing it into a disposal receptacle like a garbage can. It should be triggered when the task requires discarding an object (e.g., 'put it in…
This skill should be used when creating "interactive web components", "live demos", "prototype interfaces", "component showcases", "interactive examples", "web-based tools", or…
This skill should be used when the user asks to "define a feature", "create a BaseFeature class", "track feature versions", "set up metadata store", "field-level dependen — from…
Voice agents represent the frontier of AI interaction - humans speaking naturally with AI systems. The challenge isn't just speech recognition and synthesis, it's achievi — from…