Compute spatial statistics for spatial transcriptomics data using Squidpy. Calculate Moran's I, Geary's C, spatial autocorrelation, co-occurrence analysis, and neighborho — from…
Detects spatially variable genes, spatial autocorrelation, and cell-type colocalization for spatial transcriptomics using Squidpy with PySAL/esda for local statistics.
Visualize spatial transcriptomics data using Squidpy and Scanpy. Create tissue plots with gene expression, clusters, and annotations overlaid on histology images.
Quantifies alternative splicing events (PSI/percent spliced in) from RNA-seq using SUPPA2 from transcript TPM or rMATS-turbo from BAM files.
Transcribe DNA to RNA and translate to protein using Biopython. Use when converting between DNA, RNA, and protein sequences, finding ORFs, or using alternative codon tabl — from…
Comprehensive variant annotation using bcftools annotate/csq, VEP, SnpEff, and ANNOVAR. Add database annotations, predict functional consequences, and assess clinical sig — from…
Generate reproducible bioinformatics/data-science Methods + run documentation from workflow run artifacts (Nextflow/Snakemake/CWL), including a top-of-doc workflow summary, exact…
End-to-end pooled and single-cell CRISPR screen analysis from FASTQ to hit genes. Orchestrates library design QC, guide counting, six-stage screen QC (plasmid Gini, replicate…
End-to-end gene regulatory network inference pipeline from processed single-cell data to regulon discovery and perturbation simulation.
Orchestrates an end-to-end MeRIP-seq / m6A-seq analysis from raw FASTQ to differential m6A peak calls and metagene plots, chaining fastp adapter trimming, STAR splice-aware genome…
End-to-end multi-omics integration workflow. Orchestrates data harmonization, MOFA/mixOmics integration, factor interpretation, and downstream analysis across transcripto — from…
End-to-end Ribo-seq analysis from FASTQ to translation efficiency and ORF detection. Use when analyzing ribosome profiling data to study translation. — from bg-szy/TOP-SKILLS
End-to-end spatial transcriptomics workflow for Visium/Xenium data. Covers data loading, preprocessing, spatial analysis, domain detection, and visualization with Squidpy — from…
Orchestrates the end-to-end bulk short-read alternative-splicing pipeline from FASTQ to differential splicing, chaining fastp QC, cohort-consistent STAR 2-pass alignment (one…
Use when you have transcript-level quantification files (quant.gz, h5, or similar) from a known upstream quantifier (salmon, kallisto, sailfish, oarfish) and need to import them…
Use when implementing data analysis pipelines, statistical tests, or bioinformatics workflows in code (Python/R), particularly for genomics, transcriptomics, proteomics, or other…
Use when you have raw FASTQ sequencing reads (single-end or paired-end) and a reference transcriptome FASTA file, and you need to determine which transcript(s) each read aligns to…
Use biotech-pitch-deck-narrative for academic writing workflows that need structured investor-facing storytelling, explicit assumptions, and clear output boundaries.
TRIGGER aggressively for BIRD (BIRD1/2/3) routing-daemon configuration work. Positive signals: - File patterns: bird.conf, bird2.conf, bird3.conf, bird6.conf, any *.conf file that…
Claude'a herhangi bir videoyu izleme yeteneği kazandıran skill — yt-dlp ile indirir, ffmpeg ile frame çeker, transcript alır, Claude'a iletir. /watch komutu ile çalışır.
Hyperframes-based video template for retro pixel deck motion design. Use when users want a high-fidelity, multi-scene HTML-to-video composition with advanced transitions — from…
Use when defining a new role in Bknd authorization system. Covers role properties (implicit_allow, is_default, permissions), permission assignment, role hierarchies, and common…
Activate when: user says 'this can't happen,' 'never happened in N years,' 'our models say it's near-zero'; user is stress-testing a strategy or portfolio against extreme…
Adds a complete blog feature to an existing Blazor WebAssembly Static Web App with Azure Functions backend and Azure File Share for markdown storage.
Produce a full greeting/blessing compilation video (birthday, anniversary, farewell, bar/bat mitzvah) from a folder of raw self-recorded clips — one clip per person.
Use when when you have tandem mass spectra from ribosomally synthesized peptides (RiPPs) and suspect the presence of unknown or non-standard post-translational modifications that…
React editor components for WordPress blocks in Oh My Brand! theme. useBlockProps, InspectorControls, MediaUpload, and attributes. Use when writing edit.tsx files.
Copy-paste scaffolds for Oh My Brand! blocks. Templates for block.json, render.php, helpers.php, view.ts, style.css, and tests. Use when creating new blocks.
Work with BlockNote, a block-based rich text editor for React. Use when the user mentions "blocknote", "BlockNote editor", "block-based editor", "insertBlocks", "updateBlock",…
Create a new technical blog post with deep educational value and professional quality
Review and improve the blog post draft for clarity, engagement, and authentic voice.
Track blog post performance and generate insights for continuous improvement. USE WHEN user says 'track post performance', 'analyze blog metrics', 'what posts performed well',…
Complete workflow for creating and publishing blog articles with Claude AI and WordPress MCP integration.
Complete blog article creation workflow with automatic OG image generation. Use for creating new blog articles - supports prime (research), plan, execute, validate, and…
Use when managing blog-cc static sites - content creation, deployment, themes, courses. Conversational content management with AI generation, validation, and GitHub Pages…
Generate dark-mode-compatible inline SVG data visualization charts for blog posts. Supports horizontal bar, grouped bar, donut, line, lollipop, area, and radar charts with…
Create/update Markdown blog posts and topic metadata for this Next.js static-export blog (multi-language en/tr).
Use when the user asks to generate a blog cover image, thumbnail, or article header. Automatically uses modern typography, brand logos, and Google Search grounding to cre — from…
Generate the branded SVG cover image for a blog post on the Tertiary Infotech Academy CMS. Use when adding, editing, or debugging the AI-rendered featured image — anything that…
Use when the user asks to generate a blog cover image, thumbnail, or article header. Automatically uses modern typography, brand logos, and Google Search grounding to cre — from…
Tự động crawl nội dung bài viết kỹ thuật từ liên kết Dev.to (sử dụng Dev.to public API) và lưu trữ trực tiếp dưới dạng Markdown/TSX vào dự án.
博客前台与管理后台 CSS 设计与实现专家。Use when users ask to redesign, polish, or implement styles/components in this repo: (1) site frontend based on `web/static/site/tufte-css/tufte.css`, with…
옵시디언 블로그 빌드 + 배포 스킬. `/blog`, "블로그 빌드", "블로그 배포", "deploy blog" 등의 요청에서 반드시 트리거한다. jongdeug.log (Obsidian → static HTML) 을 `build.js` 로 생성하고 상태/목록 조회도 지원한다.
Review and improve English translations in bilingual blog posts. Use when the user wants to review, edit, or polish English text in blog posts that have Japanese originals with…
Moteur de production d'articles de blog pour {{COMPANY_NAME}} — workflow bout-en-bout (recherche → plan → rédaction → validation SEO → scoring qualité ≥ 90/100 → livraison),…
Verify claims against referenced sources. Checks if blog content accurately represents external resources, APIs, or documentation.
Stop using stock photos. Generate accessible, lightweight SVG figures for any blog or CMS - flow diagrams, comparison bar charts, taxonomy/Venn diagrams, annotated terminal mocks,…
Write a blog post from chat summary with multi-language support (generic, works for any user)
Transform completed Red Hat Showroom lab modules or demo content into blog posts for Red Hat Developer, internal blogs, or marketing platforms.
writes the full article from the optimized brief in the user brand voice. it keeps the useful parts of the source transcript and removes rambling, filler, and fake certainty.
Create a professional, eye-catching blog post header image sized for web (1200×628) with optional title composition guidance.
Qiita/Zennの過去記事データを基にした、tamakiiiiの個人最適化ブログ戦略スキル。タイトル設計、トピック選定、記事構成の実績パターンを提供する。Use for: Qiita記事, Zenn記事, テックブログ, タイトル設計, ネタ選定.
Auto-generate matching hero and inline images for blog posts. The agent reads the content, derives visual prompts, and produces a ready-to-use image set.
Use when blog post has local images (img/ directory) that need to be visually understood, inserted into the article at appropriate positions, and/or migrated from local relative…
Cloudflare Pages 배포, SEO 설정, Analytics, Google Ads 삽입, 빌드 최적화 스킬. 배포, SEO, 성능, 분석, 광고 관련 작업 시 반드시 이 스킬을 사용할 것.
Managing Cyril's Workshop blog posts and devblog via API - creating, editing, publishing, and updating content programmatically — from lawless-m/Robocyril
Managing Cyril's Workshop blog posts and devblog via API - creating, editing, publishing, and updating content programmatically — from lawless-m/Robocyril
Use for all blog writing tasks including creating articles (Zenn Japanese, dev.to/Medium English), managing ideas, and setting up blog projects.
Use for all blog writing tasks including creating articles (Zenn Japanese, dev.to/Medium English), managing ideas, and setting up blog projects.
Central coordinator for blog writing workflow with multi-agent execution. USE WHEN user says 'write a blog post', 'create blog content', 'start blog workflow', OR user wants to…