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Cibersort Immune Infiltration Analysis

Category: General  ·  Sub-category: general-misc  ·  Last updated:
type:debug
Use when estimating relative immune cell infiltration from a bulk expression matrix with a CIBERSORT-style nu-SVR deconvolution workflow based on an LM22 signature matrix, comparing one case group against one control group, and generating structured tables plus immune-fraction plots. NOT for single-cell RNA-seq, spatial data, clinical diagnosis, or workflows that require the original hosted CIBERSORT web service.

What this skill does

Cibersort Immune Infiltration Analysis is a community-contributed Claude Code skill in the general-misc sub-category. It ships as a SKILL.md file that Claude Code auto-discovers under ~/.claude/skills/cibersort-immune-infiltration-analysis/ and loads when your prompt matches the skill's trigger.

When to invoke it: Use when estimating relative immune cell infiltration from a bulk expression matrix with a CIBERSORT-style nu-SVR deconvolution workflow based on an LM22 signature matrix, comparing one case group against one control group, and generating structured tables plus immune-fraction plots. NOT for single-cell RNA-seq, spatial data, clinical diagnosis, or workflows that require the original hosted CIBERSORT web service.

Who uses this skill

The Cibersort Immune Infiltration Analysis Claude Code skill is built for Claude Code users and developers across all disciplines looking for general-purpose AI assistance. It's part of ClaudSkills (also referred to as Claude Skills or Claude Code Skills) — the open community-curated registry of 69,000+ SKILL.md files for Anthropic's Claude Code agent and the wider Claude ecosystem (Claude API, Claude Agent SDK).

How to install

Free

Manual install (2 steps)

mkdir -p ~/.claude/skills/cibersort-immune-infiltration-analysis
curl -L https://claudskills.com/skills/cibersort-immune-infiltration-analysis/SKILL.md \
  -o ~/.claude/skills/cibersort-immune-infiltration-analysis/SKILL.md

Or just download SKILL.md directly and drop it into ~/.claude/skills/cibersort-immune-infiltration-analysis/. Claude Code auto-discovers it on next session.

Skills live at ~/.claude/skills/cibersort-immune-infiltration-analysis/SKILL.md on macOS/Linux, or %USERPROFILE%\.claude\skills\cibersort-immune-infiltration-analysis\SKILL.md on Windows. See the full install guide for step-by-step instructions.

Pro

One-click install via the desktop app

The ClaudSkills desktop app installs any skill directly into ~/.claude/skills/ with one click — no terminal required. Pro starts at $9/mo or $149 lifetime.

Pro

For the full experience including quality scoring and one-click install features for each skill — upgrade to Pro.

Attribution & license

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Part of ClaudSkills — the open registry for Claude Skills & Claude Code Skills.  ·  What's New  ·  Install guide  ·  About  ·  llms.txt

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