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Single Cell Graph Construction Neighborhood

Category: General  ·  Sub-category: general-misc  ·  Last updated:
Use when you have preprocessed single-cell RNA-seq data (normalized and dimensionality-reduced via PCA) and need to establish cell-to-cell connectivity for trajectory inference, clustering validation, or graph-based visualization.
Security AStatic scan found no risk patternsHow grading works ›

About this skill (catalog notes)

Single Cell Graph Construction Neighborhood includes explicit scope boundaries (an explicit 'when not to use' or 'out of scope' section); worked examples; at least one code block. The SKILL.md runs to about 782 words, in the catalog's typical mid-range.

Source
holobiomicslab.cnrs.fr
License
Apache-2.0
Original author
HolobiomicsLab
Indexed lastmod
Catalog position
General · general-misc
Indexed related skills
10

How Single Cell Graph Construction Neighborhood fits the catalog

Single Cell Graph Construction Neighborhood sits in the General category under the general-misc sub-topic in the ClaudSkills catalog. There are 10 related skills indexed alongside it; comparing a few before installing usually reveals which fits your workflow best.

These notes are auto-generated from features detected in the SKILL.md file and from this catalog's structure — they aren't part of the source repository.

What this skill does

Single Cell Graph Construction Neighborhood is a community-contributed Claude Code skill in the general-misc sub-category. It ships as a SKILL.md file that Claude Code auto-discovers under ~/.claude/skills/single-cell-graph-construction-neighborhood/ and loads when your prompt matches the skill's trigger.

When to invoke it: Use when you have preprocessed single-cell RNA-seq data (normalized and dimensionality-reduced via PCA) and need to establish cell-to-cell connectivity for trajectory inference, clustering validation, or graph-based visualization.

Who uses this skill

The Single Cell Graph Construction Neighborhood Claude Code skill is built for Claude Code users and developers across all disciplines looking for general-purpose AI assistance. It's part of ClaudSkills (also referred to as Claude Skills or Claude Code Skills) — the open community-curated registry of 146,000+ SKILL.md files for Anthropic's Claude Code agent and the wider Claude ecosystem (Claude API, Claude Agent SDK).

How to install

Free

Manual install (2 steps)

mkdir -p ~/.claude/skills/single-cell-graph-construction-neighborhood
curl -L https://claudskills.com/skills/single-cell-graph-construction-neighborhood/SKILL.md \
  -o ~/.claude/skills/single-cell-graph-construction-neighborhood/SKILL.md

Or just download SKILL.md directly and drop it into ~/.claude/skills/single-cell-graph-construction-neighborhood/. Claude Code auto-discovers it on next session.

Skills live at ~/.claude/skills/single-cell-graph-construction-neighborhood/SKILL.md on macOS/Linux, or %USERPROFILE%\.claude\skills\single-cell-graph-construction-neighborhood\SKILL.md on Windows. See the full install guide for step-by-step instructions.

Telegram

📱 Install from your phone or desktop Telegram

Open @claudskills_bot on Telegram, tap Open Desktop App, and the desktop app installs this skill for you. Or share the bot link with a colleague — they get the same one-tap install. Learn more →

Pro

One-click install via the desktop app

The ClaudSkills desktop app installs any skill directly into ~/.claude/skills/ with one click — no terminal required. Pro starts at $9/mo or $149 lifetime.

Pro

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See pricing → Download desktop app

Frequently asked questions

How do I install the Single Cell Graph Construction Neighborhood Claude Code skill?
Install via the ClaudSkills desktop app (one click) or copy SKILL.md from the source repository to ~/.claude/skills/single-cell-graph-construction-neighborhood/SKILL.md and restart Claude Code. Both flows are detailed at claudskills.com/install/.
What does the Single Cell Graph Construction Neighborhood skill do?
Use when you have preprocessed single-cell RNA-seq data (normalized and dimensionality-reduced via PCA) and need to establish cell-to-cell connectivity for trajectory inference, clustering validation, or graph-based visualization.
Is this skill free to install?
Yes. ClaudSkills is an open registry — every skill keeps its source repository's license, and manual install via copy is free. ClaudSkills Pro ($9/mo, $79/yr, or $149 one-time) adds one-click install via the desktop app and a multi-signal Quality Score.
When should I use the Single Cell Graph Construction Neighborhood skill?
Use Single Cell Graph Construction Neighborhood when your Claude Code task falls under the General category — specifically in the general misc area. Claude Code auto-discovers installed skills and invokes the right one based on the task description, so you can also ask Claude directly (e.g. "use Single Cell Graph Construction Neighborhood" or describe the task and let Claude pick). Browse related skills at /category/general/.
What is a Claude Code skill and how does the Single Cell Graph Construction Neighborhood skill fit in?
A Claude Code skill is a SKILL.md file that lives under ~/.claude/skills/<name>/ and tells the Claude Code CLI agent how to perform a specific task (instructions, prompts, allowed tools). Skills are auto-discovered at session start. Single Cell Graph Construction Neighborhood is one of 67,000+ skills indexed in the open ClaudSkills catalog, classified under the General category. Learn more at /learn/what-is-a-claude-skill/.

Attribution & license

Cite this skill

If you reference this skill in a blog post, paper, or documentation, you can cite it as:

APA
HolobiomicsLab. (2026). Single Cell Graph Construction Neighborhood [Claude Code skill]. ClaudSkills. https://claudskills.com/skills/single-cell-graph-construction-neighborhood/
BibTeX
@misc{single-cell-graph-construction-neighborhood-2026,
  author    = {HolobiomicsLab},
  title     = {Single Cell Graph Construction Neighborhood [Claude Code skill]},
  year      = {2026},
  publisher = {ClaudSkills},
  url       = {https://claudskills.com/skills/single-cell-graph-construction-neighborhood/}
}

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Security scan

Grade A · scanned 2026-07-06 — free static scan against the OWASP Agentic Skills Top 10.

No risk patterns were found in any of the ten OWASP-aligned categories. How grading works ›

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