Single Cell Spatial Metabolomics Data Processing includes explicit scope boundaries (an explicit 'when not to use' or 'out of scope' section). The SKILL.md runs to about 831 words, in the catalog's typical mid-range.
Single Cell Spatial Metabolomics Data Processing sits in the General category under the general-misc sub-topic in the ClaudSkills catalog. There are 10 related skills indexed alongside it; comparing a few before installing usually reveals which fits your workflow best.
These notes are auto-generated from features detected in the SKILL.md file and from this catalog's structure — they aren't part of the source repository.
Single Cell Spatial Metabolomics Data Processing is a community-contributed Claude Code skill in the general-misc sub-category. It ships as a SKILL.md file that Claude Code auto-discovers under ~/.claude/skills/single-cell-spatial-metabolomics-data-processing/ and loads when your prompt matches the skill's trigger.
When to invoke it: Use when you have raw IMC and SIMS image data from the same tissue region(s) and need to: (1) register the two modalities spatially, (2) segment individual cells across both images, (3) extract per-cell protein and metabolite intensity vectors, and (4) prepare the data for downstream joint analysis.
The Single Cell Spatial Metabolomics Data Processing Claude Code skill is built for Claude Code users and developers across all disciplines looking for general-purpose AI assistance. It's part of ClaudSkills (also referred to as Claude Skills or Claude Code Skills) — the open community-curated registry of 146,000+ SKILL.md files for Anthropic's Claude Code agent and the wider Claude ecosystem (Claude API, Claude Agent SDK).
mkdir -p ~/.claude/skills/single-cell-spatial-metabolomics-data-processing curl -L https://claudskills.com/skills/single-cell-spatial-metabolomics-data-processing/SKILL.md \ -o ~/.claude/skills/single-cell-spatial-metabolomics-data-processing/SKILL.md
Or just download SKILL.md directly and drop it into ~/.claude/skills/single-cell-spatial-metabolomics-data-processing/. Claude Code auto-discovers it on next session.
Skills live at ~/.claude/skills/single-cell-spatial-metabolomics-data-processing/SKILL.md on macOS/Linux, or %USERPROFILE%\.claude\skills\single-cell-spatial-metabolomics-data-processing\SKILL.md on Windows. See the full install guide for step-by-step instructions.
Open @claudskills_bot on Telegram, tap Open Desktop App, and the desktop app installs this skill for you. Or share the bot link with a colleague — they get the same one-tap install. Learn more →
The ClaudSkills desktop app installs any skill directly into ~/.claude/skills/ with one click — no terminal required. Pro starts at $9/mo or $149 lifetime.
For the full experience including quality scoring and one-click install features for each skill — upgrade to Pro.
SKILL.md from the source repository to ~/.claude/skills/single-cell-spatial-metabolomics-data-processing/SKILL.md and restart Claude Code. Both flows are detailed at claudskills.com/install/.SKILL.md file that lives under ~/.claude/skills/<name>/ and tells the Claude Code CLI agent how to perform a specific task (instructions, prompts, allowed tools). Skills are auto-discovered at session start. Single Cell Spatial Metabolomics Data Processing is one of 67,000+ skills indexed in the open ClaudSkills catalog, classified under the General category. Learn more at /learn/what-is-a-claude-skill/.If you reference this skill in a blog post, paper, or documentation, you can cite it as:
@misc{single-cell-spatial-metabolomics-data-processing-2026,
author = {HolobiomicsLab},
title = {Single Cell Spatial Metabolomics Data Processing [Claude Code skill]},
year = {2026},
publisher = {ClaudSkills},
url = {https://claudskills.com/skills/single-cell-spatial-metabolomics-data-processing/}
}Grade A · scanned 2026-07-06 — free static scan against the OWASP Agentic Skills Top 10.
No risk patterns were found in any of the ten OWASP-aligned categories. How grading works ›
Browse all General skills in the ClaudSkills registry, or explore these other picks from the same category:
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SKILL.md files, not affiliated with, endorsed by, or sponsored by Anthropic.