Use when correcting batch effects in merged bulk expression matrices with sample-level batch metadata while preserving biological group structure and generating before-and-after…
Builds background-gap-objective logic for biomedical manuscript introductions with clear study positioning and disciplined narrative structure.
Use when determining author order on research manuscripts, assigning CRediT contributor roles for transparency, documenting individual contributions to collaborative projects, or…
Sequence alignment and alignment file processing with Biopython (Bio.Align/Bio.AlignIO), triggered when you need global/local pairwise alignment, MSA read/write/format conversion,…
Local schedule management for adding events, tracking deadlines, generating reminders, and detecting time conflicts when users need offline scheduling with optional popup…
Structures and writes discussion sections for academic papers and research reports. Use when writing a discussion section, interpreting research results, connecting findings to…
One-click synchronization and standardization of reference formats in literature management tools, intelligently fixing metadata errors.
Use when interpreting scientific graphs and charts, explaining data visualizations for research presentations, writing figure captions for publications, or analyzing trends in…
Programmatically query public single-cell study metadata from the Broad Institute Single Cell Portal REST API when you need to search and filter datasets by organism, tissue,…
Monitor and summarize competitor clinical trial status changes from ClinicalTrials.gov.
Comprehensive tool for computational mass spectrometry using PyOpenMS; use when you need to read/write MS formats (mzML/mzXML/MGF), run signal processing (smoothing/peak picking),…
Automated abstract screening tool for systematic literature reviews with PRISMA workflow support.
Composes a Discussion around key findings, mechanisms, clinical relevance, and limitations. Use when writing or improving a Discussion section for any biomedical manuscript —…
Generates scientifically sound inclusion and exclusion criteria for Meta-Analysis based on a given title or keywords.
Recommends target journals for manuscript submission by analyzing the paper topic/abstract and the journal distribution of similar PubMed literature; use when users ask for…
Builds professional search strategies for PubMed, Embase, Web of Science, and similar databases. Use when a user needs to construct a MeSH-based Boolean query, design a systematic…
Professional beautification tool for gene expression heatmaps, automatically adds clustering trees, color annotation tracks, and intelligently optimizes label layout.
Assists researchers in generating PROSPERO registration content for meta-analyses from a title and optional protocol. Use when the user wants to draft a PROSPERO registration form.
Use when writing medical school personal statements, residency application essays, fellowship statements, or graduate school admissions essays.
Use when mapping patent claims to products, analyzing patent infringement, or preparing freedom-to-operate analyses.
Generates complete comparative network-toxicology research designs from a user-provided exposure pair, shared toxic phenotype, and validation direction.
Design a structured case-control study framework with explicit source population logic, control selection rules, matching decisions, exposure measurement planning, and…
A clinical-grade PII/PHI detection and de-identification tool for healthcare text data.
Generates a meta-analysis baseline characteristics section (text + table) from raw data. Supports Chinese and English.
Extracts key meeting information in chronological order and outputs decisions and action items; use when you need meeting minutes, action tracking, or project sync notes from…
Convert reference lists and in-text citations between RIS, BibTeX, plain text, and CSL-JSON, triggered when you need to unify bibliography/citation styles before journal…
Batch-unify typography (font family, size, italics) for Word table cells and embedded charts; use when you need consistent formatting across theses/reports without changing body…
Use study limitations drafter for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.
Calculate precise buffer recipes with accurate mass and volume measurements for molecular biology and biochemistry.
Filter and match postdoctoral fellowship opportunities based on applicant nationality, years since PhD, and research field from a curated database.
Statistical analysis and reporting for experimental datasets; use when you need to interpret experimental results, test significance (t-tests/ANOVA), or generate reproducible…
Track lab equipment calibration dates and send maintenance reminders for pipettes, balances, centrifuges, and other instruments.
Use when formatting references for journal submission, converting between citation styles (APA, MLA, Vancouver, Chicago), generating bibliographies for manuscripts, or ensuring…
Generates complete dual-disease transcriptomic + machine learning research designs from a user-provided disease pair.
Use when converting medical text between academic and patient-friendly tones, translating medical jargon for patients, adapting research papers for public audiences, or rewriting…
Generate professional slide-deck SVG images (not PPTX/PDF) when users ask to “create slides / slide deck / PPT” and need image outputs.
Use facs gating viz style for data analysis workflows that need structured execution, explicit assumptions, and clear output boundaries.
Draw ROB2 risk-of-bias plots, including a Traffic Light Plot and a Summary Bar Plot. Input is a CSV file with ROB2 assessments for each study; output are two PNG plot files.
Classifies and organizes literature by theme, method, and conclusion; use when you need to batch-read a folder of PDF/MD/DOCX/TXT files and output a structured CSV for literature…
Perform pre-experiment calculations and generate step-by-step preparation protocols for dilutions, solution preparation, dissolution, and % concentrations when planning…
Detect copy number variations from whole genome sequencing data and generate publication-quality genome-wide CNV plots.
Organizes the evidence and competitive landscape around a drug, target, or pathway by separating disease relevance, tractability, preclinical evidence, clinical evidence, modality…
Calculate temperature excursion risks for cold chain transport. Assesses route risk, packaging suitability, and monitoring requirements for biological samples and pharmaceuticals…
Checks consistency across title, abstract, methods, results, figures, tables, and supplements to identify internal contradictions and version drift in biomedical manuscripts.
Venue-specific LaTeX templates, formatting requirements, and submission guidelines for journals, conferences, posters, and grants—use when a target venue imposes strict layout,…
Converts research text into a Mermaid technical roadmap flowchart. Use when the user provides research proposals, experiment designs, or scientific text and asks for a roadmap or…
Automatically identify Western Blot gel bands, perform densitometric analysis, and calculate normalized values relative to loading controls.
Generate forest plots for meta-analysis of survival data. Input is a CSV file containing study names, HR and 95% confidence intervals, output forest plot PNG and data table CSV.
Access bioDBnet REST services for biological identifier conversion, pathway retrieval, and ortholog mapping.
Generates complete process-related diagnostic biomarker bioinformatics research designs from a user-provided disease context, gene-family or pathway theme, and validation…
Encrypt/decrypt local files, redact sensitive information in documents, and validate password strength when handling private data or preparing files for sharing.
Use when building a decision tree model in R and generating feature importance ranking outputs. Supports classification and regression, automatic task detection, parameter…
Acknowledges limitations in sample, design, measurement, and validation in a professional way that improves credibility without undermining the whole paper.
Automatically finds and ranks PubMed references for each sentence in scientific text; use when you need titles, DOIs, and brief recommendation reasons from the PubMed E-utilities…
Process images for web development — resize, crop, trim whitespace, convert formats (PNG/WebP/JPG), optimise file size, generate thumbnails, create OG card images.
Use when finding open access journals, checking journal policies, or identifying predatory publishers.
Generates complete single-compound network-toxicology research designs from one exposure, one disease or toxic phenotype, and a validation direction.
Generates complete FAERS pharmacovigilance study designs for one-drug whole-profile safety mapping using signal detection, subgroup analysis, onset/seriousness characterization,…
Use poster layout planner for other workflows that need structured execution, explicit assumptions, and clear output boundaries.
Use when generating Sankey or alluvial plots from sample annotation tables where rows are samples and selected columns are categorical stages such as risk group, response status,…